BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C05LP1|AL426335
(774 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig891 1475 0.0
>3x_Contig891
Length = 5018
Score = 1475 bits (743), Expect = 0.0
Identities = 768/776 (98%), Gaps = 2/776 (0%)
Strand = Plus / Plus
Query: 1 actgctgtttccaaacggagtgngccaagacatcgacaccttattttaagtatcgtttcg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1343 actgctgtttccaaacggagtgagccaagacatcgacaccttattttaagtatcgtttcg 1402
Query: 61 ggcgttcgagacacctcacttgcagacccttggcaccgataaagcccggtgggtcacgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 ggcgttcgagacacctcacttgcagacccttggcaccgataaagcccggtgggtcacgtg 1462
Query: 121 cacactgtccgcaccgcaccgagcattttcgggtgtggcaaacacggtgcgaaaaatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 cacactgtccgcaccgcaccgagcattttcgggtgtggcaaacacggtgcgaaaaatggg 1522
Query: 181 tttccagcacagccgtttctggaagaaggccagaccaagactcatctttgatcatacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 tttccagcacagccgtttctggaagaaggccagaccaagactcatctttgatcatacatc 1582
Query: 241 cacatatccaggtctcctgtgccttaggctgccactaggttccatacgcacccagttgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 cacatatccaggtctcctgtgccttaggctgccactaggttccatacgcacccagttgca 1642
Query: 301 cccctggtttccggtcaggaacacccaggacgatgatcatcttgtacttgacagtcagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 cccctggtttccggtcaggaacacccaggacgatgatcatcttgtacttgacagtcagta 1702
Query: 361 gttagattcagtccatgtagtctgttggactacatgaaaattggagtwaactaggtgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1703 gttagattcagtccatgtagtctgttggactacatgaaaattggagtaaactaggtgtgt 1762
Query: 421 gtatattgtatgtwtgtttacgtcgggtatccctatttcatatgggcctgtgactcgtaa 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1763 gtatattgtatgtatgtttacgtcgggtatccctatttcatatgggcctgtgactcgtaa 1822
Query: 481 aactctatcacttgatcggatgaggttgcgtcagtgacatttttatcgtctcttattctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1823 aactctatcacttgatcggatgaggttgcgtcagtgacatttttatcgtctcttattctt 1882
Query: 541 acgaacctgggaaagcgtag-ntnattcccttaccgaa-gcttcaaaaccggctttgtac 598
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 1883 acgaacctgggaaagcgtagcgatattcccttaccgaaggcttcaaaaccggctttgtac 1942
Query: 599 accggtgaaagcgagagatccgcagtcaggacctcgaacaacatgctgggttcaaaccat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1943 accggtgaaagcgagagatccgcagtcaggacctcgaacaacatgctgggttcaaaccat 2002
Query: 659 acatctgctggggcagatgaatcgtatatcacgtttgtgctcgggtgttctactgtggtg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2003 acatctgctggggcagatgaatcgtatatcacgtttgtgctcgggtgttctactgtggtg 2062
Query: 719 tccttcaatttggtatacaaatcttgtaacatctcatcgctgaagcctgttcctat 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2063 tccttcaatttggtatacaaatcttgtaacatctcatcgctgaagcctgttcctat 2118
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3537
Number of Sequences: 1807
Number of extensions: 3537
Number of successful extensions: 13
Number of sequences better than 1.0e-20: 1
length of query: 774
length of database: 10,358,551
effective HSP length: 16
effective length of query: 758
effective length of database: 10,329,639
effective search space: 7829866362
effective search space used: 7829866362
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)